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fractional coordinates : ウィキペディア英語版
fractional coordinates

In crystallography, a fractional coordinate system is a coordinate system in which the edges of the unit cell are used as the basic vectors to describe the positions of atomic nuclei. The unit cell is a parallelepiped defined by the lengths of its edges a, b, c and angles between them α, β, γ as shown in the figure below.
==Conversion to cartesian coordinates==
If the fractional coordinate system has the same origin as the cartesian coordinate system, the a-axis is collinear with the x-axis, and the b-axis lies in the xy-plane, fractional coordinates can be converted to cartesian coordinates through the following transformation matrix:〔(http://graphics.med.yale.edu:5080/TriposBookshelf/sybyl/crystal/crystal_appendix2.html ) Probably a slightly unstable reference for the transformation matrix〕〔OpenBabel source code〕〔(http://www.angelfire.com/linux/myp/FracCor/fraccor.html ) Another transformation matrix that is defined differently〕
:\begin x \\ y \\ z \\ \end =
\begin
a & b\cos(\gamma) & c\cos(\beta) \\
0 & b\sin(\gamma) & c\frac \\
0 & 0 & c\frac \\
\end
\begin \hat \\ \hat \\ \hat \\ \end

where v is the volume of a unit parallelepiped defined as
:
v =\sqrt

For the special case of a monoclinic cell (a common case) where α=γ=90° and β>90°, this gives:
:
x=a\,x_ + c\,z_\,\cos(\beta)

:
y=b\,y_

:
z=c\,v\,z_ = c\, z_\,\sin(\beta)


抄文引用元・出典: フリー百科事典『 ウィキペディア(Wikipedia)
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